Single Cell Biology
March 17-19, 2021 | 10:00AM EDT | 2:00PM UTC | 3:00PM CET*
*Program is in development and subject to change
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Showing results 1 - 9 of 9
Wednesday, March 17, 2021
Welcome and Keynote Address
10:00 AM - 10:40 AM EDT
Wednesday, March 17, 2021Chair
Shalev Itzkovitz, PhD
Weizmann Institute of Science
Keynote
Michael Elowitz, PhD
California Institute of Technology
Welcome and Keynote Address
Multicellular Circuit Design: Natural and Synthetic
10:00 AM - 10:40 AM EDT
Wednesday, March 17, 2021Speaker
Michael Elowitz, PhD
California Institute of Technology
Welcome and Keynote Address
Single Cell Biology of Mammalian Organs
10:40 AM - 1:00 PM EDT
Wednesday, March 17, 2021Co-Chairs
Arjun Raj, PhD
University of Pennsylvania
Shalev Itzkovitz, PhD
Weizmann Institute of Science
Single Cell Biology of Mammalian Organs
Sympathetic Neuroimmune Heterogeneity
10:40 AM - 11:05 AM EDT
Wednesday, March 17, 2021Speaker
Ana Domingos, PhD
University of Oxford
Single Cell Biology of Mammalian Organs
Dissecting the Alzheimer's Brain: From Single Cells to Cellular Communities
11:05 AM - 11:30 AM EDT
Wednesday, March 17, 2021Speaker
Naomi Habib, PhD
Hebrew University of Jerusalem
Single Cell Biology of Mammalian Organs
Coffee Break
11:30 AM - 11:40 AM EDT
Wednesday, March 17, 2021Single Cell Biology of Mammalian Organs
Spatial Omics of the Intestinal Epithelium
11:40 AM - 12:05 PM EDT
Wednesday, March 17, 2021Speaker
Shalev Itzkovitz, PhD
Weizmann Institute of Science
Single Cell Biology of Mammalian Organs
[NOT AVAILABLE ON DEMAND] Single Cell Analysis of the Intestine
12:05 PM - 12:30 PM EDT
Wednesday, March 17, 2021Speaker
Ramnik Xavier, MD
Massachusetts General Hospital
Single Cell Biology of Mammalian Organs
Short Talk: Single Cell Transcriptomics Reveals a Modular Macrophage Structure Conserved Across Organs and Species
12:30 PM - 12:45 PM EDT
Wednesday, March 17, 2021Speaker
Homaira Hamidzada, BS
University of Toronto, Canada
Single Cell Biology of Mammalian Organs
Short Talk: Single Cell Profiling of Acute Kidney Injury in Mice Highlights Differential Cell Death Programs and Renal Fibrosis Patterns
12:45 PM - 1:00 PM EDT
Wednesday, March 17, 2021Room: V100 - Ben Schramm Speaker
Michael Balzer, MD
University of Pennsylvania
Single Cell Biology of Mammalian Organs
Career Roundtable
2:30 PM - 3:30 PM EDT
Wednesday, March 17, 2021Panelists
Arjun Raj, PhD
University of Pennsylvania
Aaron Streets, PhD
University of California, Berkeley
Thale Jarvis, PhD
Keystone Symposia
Career Roundtable
Novel Technologies in Single Cell Analysis
5:00 PM - 8:00 PM EDT
Wednesday, March 17, 2021Co-Chairs
Arjun Raj, PhD
University of Pennsylvania
Aaron Streets, PhD
University of California, Berkeley
Novel Technologies in Single Cell Analysis
Space Exploration: Elucidating Tissue Biology with Spatial Transcriptomics
5:00 PM - 5:25 PM EDT
Wednesday, March 17, 2021Speaker
Itai Yanai, PhD
New York University School of Medicine
Novel Technologies in Single Cell Analysis
Single Cell Approaches to Collective Cell Behavior
5:25 PM - 5:50 PM EDT
Wednesday, March 17, 2021Speaker
Prisca Liberali, PhD
Friedrich Miescher Institute for Biomedical Research
Novel Technologies in Single Cell Analysis
Local and Systemic Cellular Activation in Response to Injury in Axolotl
5:50 PM - 6:15 PM EDT
Wednesday, March 17, 2021Speaker
Jessica Whited, PhD
Harvard University
Novel Technologies in Single Cell Analysis
Coffee Break
6:15 PM - 6:40 PM EDT
Wednesday, March 17, 2021Novel Technologies in Single Cell Analysis
Imaging and Sequencing Single Cells
6:40 PM - 7:05 PM EDT
Wednesday, March 17, 2021Room: V300 - Chad Littman Speaker
Aaron Streets, PhD
University of California, Berkeley
Novel Technologies in Single Cell Analysis
Image-Based Transcriptomics in the Spatial Context
7:05 PM - 7:30 PM EDT
Wednesday, March 17, 2021Room: V300 - Chad Littman Speaker
Long Cai, PhD
California Institute of Technology
Novel Technologies in Single Cell Analysis
Short Talk: Single-Molecule Chromatin Fiber Sequencing Exposes Cell and Haplotype-Specific Chromatin Architectures
7:30 PM - 7:45 PM EDT
Wednesday, March 17, 2021Room: V300 - Chad Littman Speaker
Andrew Stergachis, MD, PhD
University of Washington
Novel Technologies in Single Cell Analysis
Short Talk: scTRIP: A Method to Identify Chromatin Features Influencing Gene Expression Noise
7:45 PM - 8:00 PM EDT
Wednesday, March 17, 2021Room: V300 - Chad Littman Speaker
Clarice Hong, PhD
Washington University in St Louis
Novel Technologies in Single Cell Analysis
Thursday, March 18, 2021
Single Cell Analysis in Pathology
10:00 AM - 12:30 PM EDT
Thursday, March 18, 2021Co-Chairs
Shalev Itzkovitz, PhD
Weizmann Institute of Science
Alex Shalek, PhD
Massachusetts Institute of Technology
Single Cell Analysis in Pathology
New Tools for Visualizing Cellular Heterogeneity in Cancer
10:00 AM - 10:25 AM EDT
Thursday, March 18, 2021Room: V100 - Ben Schramm Speaker
Leeat Keren, PhD
Weizmann Institute of Science
Single Cell Analysis in Pathology
Trying to Follow in the Footsteps of Mercator: Constructing a Proteogenomics Liver Atlas
10:25 AM - 10:50 AM EDT
Thursday, March 18, 2021Room: V100 - Ben Schramm Speaker
Martin Guilliams, PhD
Ghent University - VIB
Single Cell Analysis in Pathology
Optimal Division of Labour Within a Cell Type
10:50 AM - 11:15 AM EDT
Thursday, March 18, 2021Room: V100 - Ben Schramm Speaker
Uri Alon, PhD
Weizmann Institute of Science
Single Cell Analysis in Pathology
Coffee Break
11:15 AM - 11:35 AM EDT
Thursday, March 18, 2021Single Cell Analysis in Pathology
Leveraging Single-Cell Genomics to Understand COVID-19
11:35 AM - 12:00 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Alex Shalek, PhD
Massachusetts Institute of Technology
Single Cell Analysis in Pathology
Short Talk: Time-Resolved Single-Cell RNAseq Profiling Identifies a Novel Fabp5-Expressing Subpopulation of Inflammatory Myeloid Cells in Chronic Spinal Cord Injury
12:00 PM - 12:15 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Regan Hamel, Mphil
University of Cambridge
Single Cell Analysis in Pathology
Short Talk: Vascular and Perivascular Cell Profiling Reveals the Molecular and Cellular Bases of Blood-Brain Barrier Heterogeneity
12:15 PM - 12:30 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Sarah Pfau, PhD
Harvard Medical School
Single Cell Analysis in Pathology
Meet the Editors Roundtable
2:30 PM - 3:30 PM EDT
Thursday, March 18, 2021Panelists
Lucia Palacin
JCB of Rockefeller Press
Maria Polychronidou, PhD
Molecular Systems Biology (EMBO Press)
Katherine Brown, PhD
The Company of Biologists
Ines Alvarez-Garcia
PLOS (Public Library of Science)
Sheba Agarwal
Cell Press
Allison Doerr, PhD
Nature Methods
Meet the Editors Roundtable
Computational Approaches
5:00 PM - 8:00 PM EDT
Thursday, March 18, 2021Co-Chairs
Shalev Itzkovitz, PhD
Weizmann Institute of Science
Nancy Zhang, PhD
University of Pennsylvania
Computational Approaches
Single Cell Analysis in Cancer
5:00 PM - 5:25 PM EDT
Thursday, March 18, 2021Speaker
Arjun Raj, PhD
University of Pennsylvania
Computational Approaches
Technology and Applications in Single Cell Analysis
5:25 PM - 5:50 PM EDT
Thursday, March 18, 2021Speaker
Stephen Quake, PhD
Stanford University
Computational Approaches
Integrative Analysis of Allele-Specific Copy Number and Chromatin Accessibility in Cancer
5:50 PM - 6:15 PM EDT
Thursday, March 18, 2021Speaker
Nancy Zhang, PhD
University of Pennsylvania
Computational Approaches
Coffee Break
6:15 PM - 6:40 PM EDT
Thursday, March 18, 2021Computational Approaches
Modeling and Visualizing RNA Velocity of Single Cells
6:40 PM - 7:05 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Jean Fan, PhD
Johns Hopkins University
Computational Approaches
Studying developmental robustness at whole-embryo scale and single-cell resolution
7:05 PM - 7:30 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Cole Trapnell, PhD
University of Washington
Computational Approaches
Short Talk: Mapping Single-Cell Atlases throughout Metazoa Unravels Cell Type Evolution
7:30 PM - 7:45 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Bo Wang, PhD
Stanford University
Computational Approaches
Short Talk: Accurate Whole-Cell Segmentation of Multiplexed Imaging Data by Combining Large-Scale Data Annotation and Deep Learning
7:45 PM - 8:00 PM EDT
Thursday, March 18, 2021Room: V300 - Chad Littman Speaker
Noah Greenwald, BS
Stanford University
Computational Approaches
Friday, March 19, 2021
Tracking Dynamics of Single Cells
10:00 AM - 1:00 PM EDT
Friday, March 19, 2021Co-Chairs
Shalev Itzkovitz, PhD
Weizmann Institute of Science
Sabrina Spencer, PhD
University of Colorado-Boulder
Tracking Dynamics of Single Cells
Mapping the Temporal and Spatial Dynamics of the Human Endometrium in vivo and in vitro
10:00 AM - 10:25 AM EDT
Friday, March 19, 2021Room: V100 - Ben Schramm Speaker
Roser Vento-Tormo, PhD
Sanger Wellcome Trust
Tracking Dynamics of Single Cells
Signaling Dynamics for Cellular Fate Control
10:25 AM - 10:50 AM EDT
Friday, March 19, 2021Room: V100 - Ben Schramm Speaker
Silvia Santos, PhD
Francis Crick Institute
Tracking Dynamics of Single Cells
Real-Time Visualization of Rapid Escape from Drug Treatment in Single Melanoma Cells
10:50 AM - 11:15 AM EDT
Friday, March 19, 2021Room: V100 - Ben Schramm Speaker
Sabrina Spencer, PhD
University of Colorado-Boulder
Tracking Dynamics of Single Cells
Coffee Break
11:15 AM - 11:35 AM EDT
Friday, March 19, 2021Tracking Dynamics of Single Cells
Dissecting transcriptional dynamics in development one burst at a time
11:35 AM - 12:00 PM EDT
Friday, March 19, 2021Room: V300 - Chad Littman Speaker
Hernan Garcia, PhD
University of California Berkeley
Tracking Dynamics of Single Cells
Short Talk: Optogenetic Manipulation Reveals ERK and AKT Signaling Dynamics Required for ESC Differentiation
12:00 PM - 12:15 PM EDT
Friday, March 19, 2021Room: V300 - Chad Littman Speaker
Geethika Arekatla, MS
ETH Zurich, Switzerland
Tracking Dynamics of Single Cells
Short Talk: Deciphering the Epigenetic Encoding, Heritability, and Plasticity of Transcriptional Cancer Cell States via Single Cell Multi-Omics
12:15 PM - 12:30 PM EDT
Friday, March 19, 2021Room: V300 - Chad Littman Speaker
Federico Gaiti, PhD
Weill Cornell Medicine
Tracking Dynamics of Single Cells
Short Talk: Robust, Coherent and Synchronized Circadian Clock-Controlled Oscillations along Multicellular Filaments of Anabaena cyanobacteria
12:30 PM - 12:45 PM EDT
Friday, March 19, 2021Room: V300 - Chad Littman Speaker
Rinat Arbel Goren, PhD
Weizmann Institute of Science
Tracking Dynamics of Single Cells
Short Talk: From Sequence to Space and Time: Inferring Emergent Epigenetic
Processes from Single-Cell Multi-Omics
12:45 PM - 1:00 PM EDT
Friday, March 19, 2021Room: V300 - Chad Littman Speaker
Steffen Rulands, PhD
Max Planck Institute for the Physics of Complex Systems
Tracking Dynamics of Single Cells
Fate Tracing of Single Cells
5:00 PM - 8:00 PM EDT
Friday, March 19, 2021Co-Chairs
Arjun Raj, PhD
University of Pennsylvania
John Murray, PhD
University of Pennsylvania
Fate Tracing of Single Cells
High-Throughput Lineage Tracing in the Regenerating Zebrafish Heart
5:00 PM - 5:25 PM EDT
Friday, March 19, 2021Room: V100 - Ben Schramm Speaker
Philipp Junker, PhD
Max Delbrück Center for Molecular Medicine
Fate Tracing of Single Cells
Connecting Cellular States to Cellular Fates
5:25 PM - 5:50 PM EDT
Friday, March 19, 2021Room: V100 - Ben Schramm Speaker
Allon Klein, PhD
Harvard University
Fate Tracing of Single Cells
New Genomic Technologies to Measure and Manipulate Cell Identity
5:50 PM - 6:15 PM EDT
Friday, March 19, 2021Room: V100 - Ben Schramm Speaker
Samantha Morris, PhD
Washington University in St Louis
Fate Tracing of Single Cells
Coffee Break
6:15 PM - 6:40 PM EDT
Friday, March 19, 2021Fate Tracing of Single Cells
Decoding Animal Development at Single Cell Resolution
6:40 PM - 7:05 PM EDT
Friday, March 19, 2021Speaker
John Murray, PhD
University of Pennsylvania
Fate Tracing of Single Cells
Short Talk: Detangling DNA: Single-Cell Approaches to Understanding Plasticity in Cellular Reprogramming
7:05 PM - 7:20 PM EDT
Friday, March 19, 2021Speaker
Katie Galloway, PhD
Massachusetts Institute of Technology
Fate Tracing of Single Cells
Short Talk: Clonal Tracking and Expression Profiling in the Mouse Brain via Single Cell and Spatial Transcriptomics
7:20 PM - 7:35 PM EDT
Friday, March 19, 2021Speaker
Michael Ratz, PhD
Karolinska Institutet
Fate Tracing of Single Cells
Short Talk: Impaired Differentiation: Understanding a Single Cell State Transition
7:35 PM - 7:50 PM EDT
Friday, March 19, 2021Speaker
Merrit Romeike, MS
Max Perutz Labs Vienna
Fate Tracing of Single Cells
Closing Remarks
7:50 PM - 8:00 PM EDT
Friday, March 19, 2021Organizer
Arjun Raj, PhD
University of Pennsylvania
Fate Tracing of Single Cells
